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  • 1.
    Lingas, Andrzej
    et al.
    Department of Computer Science, Lund University, 22100, Lund, Sweden.
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    (min, + ) Matrix and Vector Products for Inputs Decomposable into Few Monotone Subsequences2023In: Computing and Combinatorics: 29th International Conference, COCOON 2023, Hawaii, HI, USA, December 15–17, 2023, Proceedings, Part II / [ed] Weili Wu, Guangmo Tong, Springer, 2023, p. 55-68Conference paper (Refereed)
    Abstract [en]

    We study the time complexity of computing the (min, + ) matrix product of two n× n integer matrices in terms of n and the number of monotone subsequences the rows of the first matrix and the columns of the second matrix can be decomposed into. In particular, we show that if each row of the first matrix can be decomposed into at most m1 monotone subsequences and each column of the second matrix can be decomposed into at most m2 monotone subsequences such that all the subsequences are non-decreasing or all of them are non-increasing then the (min, + ) product of the matrices can be computed in O(m1m2n2.569) time. On the other hand, we observe that if all the rows of the first matrix are non-decreasing and all columns of the second matrix are non-increasing or vice versa then this case is as hard as the general one. Similarly, we also study the time complexity of computing the (min, + ) convolution of two n-dimensional integer vectors in terms of n and the number of monotone subsequences the two vectors can be decomposed into. We show that if the first vector can be decomposed into at most m1 monotone subsequences and the second vector can be decomposed into at most m2 subsequences such that all the subsequences of the first vector are non-decreasing and all the subsequences of the second vector are non-increasing or vice versa then their (min, + ) convolution can be computed in O~ (m1m2n1.5) time. On the other, the case when both vectors are non-decreasing or both of them are non-increasing is as hard as the general case.

  • 2.
    Lingas, Andrzej
    et al.
    Department of Computer Science, Lund University, 22100, Lund, Sweden.
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Sledneu, Dzmitry
    Malmö, Sweden.
    An Output-Sensitive Algorithm for All-Pairs Shortest Paths in Directed Acyclic Graphs2022In: CALDAM 2022: Algorithms and Discrete Applied Mathematic, Springer, 2022, p. 140-151Conference paper (Refereed)
    Abstract [en]

    First, we present a new algorithm for the single-source shortest paths problem (SSSP) in edge-weighted directed graphs, with n vertices, m edges, and both positive and negative real edge weights. Given a positive integer parameter t, in O(tm) time the algorithm finds for each vertex v a path distance from the source to v not exceeding that yielded by the shortest path from the source to v among the so called t+ light paths. A directed path between two vertices is t+ light if it contains at most t more edges than the minimum edge-cardinality directed path between these vertices. For t= O(n), our algorithm yields an O(nm)-time solution to SSSP in directed graphs with real edge weights matching that of Bellman and Ford. Our main contribution is a new, output-sensitive algorithm for the all-pairs shortest paths problem (APSP) in directed acyclic graphs (DAGs) with positive and negative real edge weights. The running time of the algorithm depends on such parameters as the number of leaves in (lexicographically first) shortest-paths trees, and the in-degrees in the input graph. If the trees are sufficiently thin on the average, the algorithm is substantially faster than the best known algorithm. Finally, we discuss an extension of hypothetical improved upper time-bounds for APSP in non-negatively edge-weighted DAGs to include directed graphs with a polynomial number of large directed cycles. © 2022, Springer Nature Switzerland AG.

  • 3.
    Gasieniec, Leszek
    et al.
    University of Liverpool, England.
    Jansson, Jesper
    Hong Kong Polytech University, Peoples Republic of China.
    Levcopoulos, Christos
    Lund University.
    Lingas, Andrzej
    Lund University.
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Pushing the Online Boolean Matrix-vector Multiplication conjecture off-line and identifying its easy cases2021In: Journal of computer and system sciences (Print), ISSN 0022-0000, E-ISSN 1090-2724, Vol. 118, p. 108-118Article in journal (Refereed)
    Abstract [en]

    Henzinger et al. posed the so-called Online Boolean Matrix-vector Multiplication (OMv) conjecture and showed that it implies tight hardness results for several basic dynamic or partially dynamic problems [STOC'15]. We first show that the OMv conjecture is implied by a simple off-line conjecture that we call the MvP conjecture. We then show that if the definition of the OMv conjecture is generalized to allow individual (i.e., it might be different for different matrices) polynomial-time preprocessing of the input matrix, then we obtain another conjecture (called the OMvP conjecture) that is in fact equivalent to our MvP conjecture. On the other hand, we demonstrate that the OMv conjecture does not hold in restricted cases where the rows of the matrix or the input vectors are clustered, and develop new efficient randomized algorithms for such cases. Finally, we present applications of our algorithms to answering graph queries. (c) 2021 Elsevier Inc. All rights reserved.

  • 4.
    Lingas, Andrzej
    et al.
    Lund Univ, Dept Comp Sci, Lund, Sweden..
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Computing the Boolean Product of Two n x n Boolean Matrices Using O(n(2)) Mechanical Operations2020In: International Journal of Unconventional Computing, ISSN 1548-7199, E-ISSN 1548-7202, Vol. 15, no 3, p. 225-236Article in journal (Refereed)
    Abstract [en]

    We study the problem of determining the Boolean product of two n x n Boolean matrices in an unconventional computational model allowing for mechanical operations. We show that O(n(2)) operations are sufficient to compute the product in this model.

  • 5.
    Dereniowski, Dariusz
    et al.
    Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, 80-233 Gdańsk, Poland.
    Lingas, Andrzej
    Department of Computer Science, Lund University, 221 00 Lund, Sweden.
    Osula, Dorota
    Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, 80-233 Gdańsk, Poland.
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Zylinski, Pawel
    Institute of Informatics, University of Gdańsk, 80-309 Gdańsk, Poland.
    Clearing directed subgraphs by mobile agents Variations on covering with paths2019In: Journal of computer and system sciences (Print), ISSN 0022-0000, E-ISSN 1090-2724, Vol. 102, p. 57-68Article in journal (Refereed)
    Abstract [en]

    We study several problems of clearing subgraphs by mobile agents in digraphs. The agents can move only along directed walks of a digraph and, depending on the variant, their initial positions may be pre-specified. In general, for a given subset S of vertices of a digraph D and a positive integer k, the objective is to determine whether there is a subgraph H = (V-H, A(H)) of D such that (a) S subset of V-H, (b) H is the union of k directed walks in D, and (c) the underlying graph of H includes a Steiner tree for S in D. Since a directed walk is a not necessarily a simple directed path, the problem is actually on covering with paths. We provide several results on the polynomial time tractability, hardness, and parameterized complexity of the problem. Our main fixed-parameter algorithm is randomized. (C) 2018 Elsevier Inc. All rights reserved.

  • 6.
    Gąsieniec, Leszek
    et al.
    Department of Computer Science, University of Liverpool, Ashton Street, Liverpool, L69 38X, UK.
    Jansson, Jesper
    Department of Computing, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong.
    Levcopoulos, Christos
    Department of Computer Science, Lund University, 22100, Lund, Sweden.
    Lingas, Andrzej
    Department of Computer Science, Lund University, 22100, Lund, Sweden.
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Pushing the Online Matrix-Vector Conjecture Off-Line and Identifying Its Easy Cases2019In: Frontiers in Algorithmics: 13th International Workshop, FAW 2019, Sanya, China, April 29 – May 3, 2019, Proceedings / [ed] Yijia Chen, Xiaotie Deng, Mei Lu, Springer, 2019, p. 156-169Conference paper (Refereed)
    Abstract [en]

    Henzinger et al. posed the so called Online Boolean Matrix-vector Multiplication (OMv) conjecture and showed that it implies tight hardness results for several basic partially dynamic or dynamic problems [STOC’15].

    We show that the OMv conjecture is implied by a simple off-line conjecture. If a not uniform (i.e., it might be different for different matrices) polynomial-time preprocessing of the matrix in the OMv conjecture is allowed then we can show such a variant of the OMv conjecture to be equivalent to our off-line conjecture. On the other hand, we show that the OMV conjecture does not hold in the restricted cases when the rows of the matrix or the input vectors are clustered.

  • 7.
    Lingas, Andrzej
    et al.
    Department of Computer Science, Lund University, Lund, 22100, Sweden.
    Persson, Mia
    Malmö University, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Extreme Witnesses and Their Applications2018In: Algorithmica, ISSN 0178-4617, E-ISSN 1432-0541, Vol. 80, no 12, p. 3943-3957Article in journal (Refereed)
    Abstract [en]

    We study the problem of computing the so called minimum and maximum witnesses for Boolean vector convolution. We also consider a generalization of the problem which is to determine for each positive value at a coordinate of the convolution vector, q smallest (largest) witnesses, where q is the minimum of a parameter k and the number of witnesses for this coordinate. We term this problem the smallest k-witness problem or the largest k-witness problem, respectively. We also study the corresponding smallest and largest k-witness problems for Boolean matrix product. First, we present an (O) over tilde (n(1.5)k(0.5))-time algorithm for the smallest or largest k-witness problem for the Boolean convolution of two n-dimensional vectors, where the notation (O) over tilde ( ) suppresses polylogarithmic in n factors. In consequence, we obtain new upper time bounds on reporting positions of mismatches in potential string alignments and on computing restricted cases of the (min, +) vector convolution. Next, we present a fast (substantially subcubic in n and linear in k) algorithm for the smallest or largest k-witness problem for the Boolean matrix product of two n x n Boolean matrices. It yields fast algorithms for reporting k lightest (heaviest) triangles in a vertex-weighted graph.

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  • 8.
    Lingas, Andrzej
    et al.
    Department of Computer Science, Lund University, Lund, Sweden.
    Persson, Mia
    Malmö högskola, Faculty of Technology and Society (TS).
    Sledneu, Dzmitry
    Centre for Mathematical Sciences, Lund University, Lund, Sweden.
    Bounds for Semi-disjoint Bilinear Forms in a Unit-Cost Computational Model2017In: Theory and Applications of Models of Computation, Springer, 2017, p. 411-423Conference paper (Refereed)
    Abstract [en]

    We study the complexity of the so called semi-disjoint bilinear forms over different semi-rings, in particular the n-dimensional vector convolution and n x n matrix product. We consider a powerful unit-cost computational model over the ring of integers allowing for several additional operations and generation of large integers. We show the following dichotomy for such a powerful model: while almost all arithmetic semi-disjoint bilinear forms have the same asymptotic time complexity as that yielded by naive algorithms, matrix multiplication, the so called distance matrix product, and vector convolution can be solved in a linear number of steps. It follows in particular that in order to obtain a non-trivial lower bounds for these three basic problems one has to assume restrictions on the set of allowed operations and/or the size of used integers.

  • 9.
    Dereniowski, Dariusz
    et al.
    Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, 80-233, Gdańsk, Poland.
    Lingas, Andrzej
    Department of Computer Science, Lund University, 221 00, Lund, Sweden.
    Persson, Mia
    Malmö högskola, Faculty of Technology and Society (TS), Department of Computer Science and Media Technology (DVMT).
    Urbańska, Dorota
    Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, 80-233, Gdańsk, Poland.
    Żyliński, Paweł
    Institute of Informatics, University of Gdańsk, 80-309, Gdańsk, Poland.
    The Snow Team Problem2017In: Fundamentals of Computation Theory: 21st International Symposium, FCT 2017, Bordeaux, France, September 11–13, 2017, Proceedings / [ed] Ralf Klasing; Marc Zeitoun, Springer, 2017, p. 190-203Conference paper (Refereed)
    Abstract [en]

    We study several problems of clearing subgraphs by mobile agents in digraphs. The agents can move only along directed walks of a digraph and, depending on the variant, their initial positions may be pre-specified. In general, for a given subset � of vertices of a digraph D and a positive integer k, the objective is to determine whether there is a subgraph �=(��,��) of D such that (a) �⊆��, (b) H is the union of k directed walks in D, and (c) the underlying graph of H includes a Steiner tree for �. We provide several results on parameterized complexity and hardness of the problems.

  • 10. Lingas, Andrzej
    et al.
    Persson, Mia
    Malmö högskola, Faculty of Technology and Society (TS).
    A Fast Parallel Algorithm for Minimum-Cost Small Integral Flows2015In: Algorithmica, ISSN 0178-4617, E-ISSN 1432-0541, Vol. 72, no 2, p. 607-619Article in journal (Refereed)
    Abstract [en]

    We present a new approach to the minimum-cost integral flow problem for small values of the flow. It reduces the problem to the tests of simple multivariate polynomials over a finite field of characteristic two for non-identity with zero. In effect, we show that a minimum-cost flow of value k in a network with n vertices, a sink and a source, integral edge capacities and positive integral edge costs polynomially bounded in n can be found by a randomized PRAM, with errors of exponentially small probability in n, running in O(klog(kn)+log(2)(kn)) time and using 2 (k) (kn) (O(1)) processors. Thus, in particular, for the minimum-cost flow of value O(logn), we obtain an RNC2 algorithm, improving upon time complexity of earlier NC and RNC algorithms.

  • 11. Floderus, Peter
    et al.
    Lingas, Andrzej
    Persson, Mia
    Malmö högskola, Faculty of Technology and Society (TS).
    Sledneu, Dzmitry
    Detecting monomials with k distinct variables2015In: Information Processing Letters, ISSN 0020-0190, E-ISSN 1872-6119, Vol. 115, no 2, p. 82-86Article in journal (Refereed)
    Abstract [en]

    We study the complexity of detecting monomials with special properties in the sum-product expansion of a polynomial represented by an arithmetic circuit of size polynomial in the number of input variables and using only multiplication and addition. We focus on monomial properties expressed in terms of the number of distinct variables occurring in a monomial. Our first result is a randomized FPT algorithm for detection of a monomial having at least k distinct variables, parametrized with respect to k. For a more restricted class of circuits, we can also provide a deterministic FPT algorithm for detection of a monomial having at most k distinct variables parametrized by the degree of the polynomial represented by the input circuit. Furthermore, we derive several hardness results on detection of monomials with such properties within exact, parametrized and approximation complexity. In particular, we observe that the detection of a monomial having at most k distinct variables is W[2]-hard for the parameter k. (C) 2014 Elsevier B.V. All rights reserved.

  • 12. Lingas, Andrzej
    et al.
    Persson, Mia
    Malmö högskola, Faculty of Technology and Society (TS).
    Extreme Witnesses and Their Applications2015In: Combinatorial Optimization and Applications: 9th International Conference, COCOA 2015, Houston, TX, USA, December 18-20, 2015, Proceedings, Springer, 2015, p. 452-466Conference paper (Refereed)
    Abstract [en]

    We study the problem of computing the so called minimum and maximum witnesses for Boolean vector convolution. We also consider a generalization of the problem which is to determine for each positive coordinate of the convolution vector, q smallest (or, largest) witnesses, where q is the minimum of a parameter k and the number of witnesses for this coordinate. We term this problem the smallest k-witness problem or the largest k-witness problem, respectively. We also study the corresponding smallest and largest k-witness problems for Boolean matrix product. In both cases, we provide algorithmic solutions and applications to the aforementioned witness problems, among other things in string matching and computing the (min, +) vector convolution.

  • 13.
    Fabijan, Aleksander
    et al.
    Malmö högskola, School of Technology (TS).
    Nilsson, Bengt J.
    Malmö högskola, School of Technology (TS).
    Persson, Mia
    Malmö högskola, School of Technology (TS).
    Competitive Online Clique Clustering2013In: Proceedings of the 8th International Conference on Algorithms and Complexity;8, Springer, 2013, p. 221-233Conference paper (Refereed)
    Abstract [en]

    Clique clustering is the problem of partitioning a graph into cliques so that some objective function is optimized. In online clustering, the input graph is given one vertex at a time, and any vertices that have previously been clustered together are not allowed to be separated. The objective here is to maintain a clustering the never deviates too far in the objective function compared to the optimal solution. We give a constant competitive upper bound for online clique clustering, where the objective function is to maximize the number of edges inside the clusters. We also give almost matching upper and lower bounds on the competitive ratio for online clique clustering, where we want to minimize the number of edges between clusters. In addition, we prove that the greedy method only gives linear competitive ratio for these problems.

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  • 14. Floderus, Peter
    et al.
    Lingas, Andrzej
    Persson, Mia
    Malmö högskola, School of Technology (TS).
    Towards More Efficient Infection and Fire Fighting2013In: International Journal of Foundations of Computer Science, ISSN 0129-0541, Vol. 24, no 1, p. 3-14Article in journal (Refereed)
    Abstract [en]

    The firefighter problem models the situation where an infection, a computer virus, an idea or fire etc. is spreading through a network and the goal is to save as many as possible nodes of the network through targeted vaccinations. The number of nodes that can be vaccinated at a single time-step is typically one, or more generally O(1). In a non-standard model, the so called spreading model, the vaccinations also spread in contrast to the standard model. Our main results are concerned with general graphs in the spreading model. We provide a very simple exact 2^(O(sqrt(n)log n))-time algorithm. In the special case of trees, where the standard and spreading model are equivalent, our algorithm is substantially simpler than that exact subexponential algorithm for trees presented in . On the other hand, we show that the firefighter problem on weighted directed graphs in the spreading model cannot be approximated within a constant factor better than 1 − 1/e unless NP ⊆ DTIME (n^(O(log log n))). We also present several results in the standard model. We provide approximation algorithms for planar graphs in case when at least two vaccinations can be performed at a time-step. We also derive trade-offs between approximation factors for polynomial-time solutions and the time complexity of exact or nearly exact solutions for instances of the firefighter problem for the so called directed layered graphs.

  • 15.
    Lingas, Andrzej
    et al.
    Department of Computer Science, Lund University, 22100, Lund, Sweden.
    Persson, Mia
    Malmö högskola, School of Technology (TS).
    A Fast Parallel Algorithm for Minimum-Cost Small Integral Flows2012In: Euro-Par 2012 Parallel Processing, Springer, 2012, p. 688-699Conference paper (Refereed)
    Abstract [en]

    We present a new approach to the minimum-cost integral flow problem for small values of the flow. It reduces the problem to the tests of simple multi-variable polynomials over a finite field of characteristic two for non-identity with zero. In effect, we show that a minimum-cost flow of value k in a network with n vertices, a sink and a source, integral edge capacities and positive integral edge costs polynomially bounded in n can be found by a randomized PRAM, with errors of exponentially small probability in n, running in O(klog(kn) + log2 (kn)) time and using 2 k (kn) O(1) processors. Thus, in particular, for the minimum-cost flow of value O(logn), we obtain an RNC 2 algorithm.

  • 16.
    Persson, Mia
    et al.
    Malmö högskola, School of Technology (TS).
    Tobian, Anders
    Malmö högskola, School of Technology (TS).
    Johansson, Per
    Malmö högskola, School of Technology (TS).
    Goode, Emil
    Malmö högskola, School of Technology (TS).
    Kruzela, Ivan
    Malmö högskola, School of Technology (TS).
    Johansson, Olof
    Lund University, Lund, Sweden.
    A new improved distributed e-healthcare system based on open standards for depression treatment2012In: ICICS '12 Proceedings of the 3rd International Conference on Information and Communication Systems, ACM Digital Library, 2012, p. 1-6, article id 9Conference paper (Other academic)
    Abstract [en]

    The use of open standards to promote responsible and available design in Internet-based healthcare systems is examined by using theoretical notations and recent research results from the literature. Moreover, empirical data will be gathered from a case study on an e-healthcare system for depression treatment. Our contribution is to initiate a discussion aiming at increasing the awareness on appropriate conceptual models for Internet-based depression treatment. Moreover, an up-to-date e-healthcare system, based on open standards and implemented with requirements of an Internet-based system treating patients suffering from depressions, is proposed.

  • 17. Figueroa, Andres
    et al.
    Goldstein, Avraham
    Jiang, Tao
    Kurowski, Maciej
    Lingas, Andrzej
    Persson, Mia
    Malmö högskola, School of Technology (TS).
    Approximate clustering of incomplete fingerprints2008In: Journal of Discrete Algorithms, ISSN 1570-8667, E-ISSN 1570-8675, Vol. 6, no 1, p. 103-108Article in journal (Refereed)
    Abstract [en]

    We study the problem of clustering fingerprints with at most p missing values (CMV(p) for short) naturally arising in oligonucleotide fingerprinting, which is an efficient method for characterizing DNA clone libraries. We show that already CMV(2) is NP-hard. We also show that a greedy algorithm yields a min(1+ln n , 2+pln l) approximation for CMV(p), and can be implemented to run in O(nl2^p) time. We also introduce other variants of the problem of clustering incomplete fingerprints based on slightly different optimization criteria and show that they can be approximated in polynomial time with ratios 2^(2p−1) and 2(1-1/(2^(2p))), respectively.

  • 18.
    Hammar, Mikael
    et al.
    Department of Computer Science, Salerno University, Baronissi (SA) 84081, Italy.
    Nilsson, Bengt J
    Malmö högskola, School of Technology (TS).
    Persson, Mia
    Malmö högskola, School of Technology (TS).
    Competitive Exploration of Rectilinear Polygons2006In: Theoretical Computer Science, ISSN 0304-3975, E-ISSN 1879-2294, Vol. 354, no 3, p. 367-378Article in journal (Refereed)
    Abstract [en]

    Exploring a polygon with robots, when the robots do not have knowledge of the surroundings can be viewed as an online problem. Typical for online problems is that decisions must be made based on past events without complete information about the future. In our case the robots do not have complete information about the environment. Competitive analysis can be used to measure the performance of methods solving online problems. The competitive ratio of such a method is the ratio between the method's performance and the performance of the best method having full knowledge of the future. We are interested in obtaining good bounds on the competitive ratio of exploring polygons and prove constant competitive strategies and lower bounds for exploring a simple rectilinear polygon in the $L_1$ metric.

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  • 19.
    Hammar, Mikael
    et al.
    Apptus Technologies AB, IDEON, SE-223 70, Lund, Sweden.
    Nilsson, Bengt J
    Malmö högskola, School of Technology (TS).
    Persson, Mia
    Malmö högskola, School of Technology (TS).
    The Online Freeze-Tag Problem2006In: LATIN 2006: Theoretical Informatics, Springer, 2006, p. 569-579Conference paper (Refereed)
    Abstract [en]

    We consider the following problem from swarm robotics:given one or more “awake” robots in some metric space M, wake upa set of “asleep” robots. A robot awakens a sleeping robot by moving tothe sleeping robot’s position. When a robot awakens, it is available toassist in awakening other slumbering robots. We investigate offline andonline versions of this problem and give a 2-competitive strategy and alower bound of 2 in the case when M is discrete and the objective isto minimize the total movement cost. We also study the case when Mis continuous and show a lower bound of 7/3 when the objective is tominimize the time when the last robot awakens.

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